Sequence Similarity Clusters for the Entities in PDB 1YND

Entity #1 | Chains: A,B
Peptidyl-prolyl cis-trans isomerase A protein, length: 165 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 33 120 177
95 % 42 139 205 Flexibility: No
Max RMSD: 2.2, Avg RMSD: 0.5
PDBFlex
90 % 42 139 217
70 % 75 206 155
50 % 79 244 133
40 % 79 246 152
30 % 79 246 156

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures