Sequence Similarity Clusters for the Entities in PDB 1Y0M

Entity #1 | Chains: A
1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1 protein, length: 61 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 31279
95 % 1 3 27275 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.6
PDBFlex
90 % 1 5 16950
70 % 1 5 15840
50 % 1 5 14298
40 % 1 9 7073
30 % 22 230 171

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1Y0M 1 A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1 SH3 domain: sequence database residues 791-851 10116 2.7.1.173 | Details 3.1.4.11 | Details
2 1YWP 1 A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1 Phospholipase C-gamma1 10116 2.7.1.173 | Details 3.1.4.11 | Details
3 1YWO 1 A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1 10116 2.7.1.173 | Details 3.1.4.11 | Details
4 1HSQ 1 A PHOSPHOLIPASE C-GAMMA (SH3 DOMAIN) 9606 3.1.4.11 | Details
5 2HSP 1 A PHOSPHOLIPASE C-GAMMA (SH3 DOMAIN) 9606 3.1.4.11 | Details