Sequence Similarity Clusters for the Entities in PDB 1Y0M

Entity #1 | Chains: A
1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1 protein, length: 61 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 31101
95 % 1 3 25714 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.6
PDBFlex
90 % 1 5 16885
70 % 1 5 15783
50 % 1 5 14232
40 % 1 9 7036
30 % 17 256 169

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures