Sequence Similarity Clusters for the Entities in PDB 1XXD

Entity #1 | Chains: A,B
Coagulation factor XI protein, length: 238 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 24702
95 % 74 74 738 Flexibility: No
Max RMSD: 2.2, Avg RMSD: 0.5
PDBFlex
90 % 74 74 772
70 % 74 74 816
50 % 85 85 705
40 % 875 908 11
30 % 1871 1945 5
Entity #2 | Chains: C,D
Ecotin protein, length: 142 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 43266
95 % 17 18 2411 Flexibility: Low
Max RMSD: 9.8, Avg RMSD: 1.6
PDBFlex
90 % 17 18 2480
70 % 18 19 2154
50 % 18 19 2205
40 % 18 19 2240
30 % 18 19 2253

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures