Sequence Similarity Clusters for the Entities in PDB 1XPM

Entity #1 | Chains: A,B,C,D
3-hydroxy-3-methylglutaryl CoA synthase protein, length: 396 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 9857
95 % 1 6 4618 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.3
PDBFlex
90 % 1 6 4696
70 % 1 6 4646
50 % 3 14 2232
40 % 3 14 2270
30 % 3 14 2268

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures