Sequence Similarity Clusters for the Entities in PDB 1XKM

Entity #1 | Chains: A,C
Distinctin chain A protein, length: 22 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 53741
95 % 1 1 31469
90 % 1 1 30573
70 % 1 1 27566
50 % 1 1 23912
40 % 1 1 22008
30 % 1 1 23865
Entity #2 | Chains: B,D
Distinctin chain B protein, length: 25 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 39102
95 % 1 1 31470
90 % 1 1 30179
70 % 1 1 27230
50 % 1 1 23913
40 % 1 1 21762
30 % 1 1 19464

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures