Sequence Similarity Clusters for the Entities in PDB 1XI5

Entity #1 | Chains: A,B,C,D,E,F,G,H,I
Clathrin heavy chain protein, length: 1630 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 1664
95 % 3 3 2201
90 % 3 3 2252
70 % 3 3 2248
50 % 3 3 2227
40 % 3 3 2223
30 % 3 3 2118
Entity #2 | Chains: J,K,L,M,N,O,P,Q,R
Auxilin J-domain protein, length: 114 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 7606
95 % 1 1 8160
90 % 1 1 8106
70 % 1 1 7842
50 % 1 1 7217
40 % 1 1 6712
30 % 1 1 5986

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures