Sequence Similarity Clusters for the Entities in PDB 1XI5

Entity #1 | Chains: A,B,C,D,E,F,G,H,I
Clathrin heavy chain protein, length: 1630 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 2024
95 % 3 3 2328
90 % 3 3 2394
70 % 3 3 2390
50 % 3 3 2364
40 % 3 3 2335
30 % 3 3 2166
Entity #2 | Chains: J,K,L,M,N,O,P,Q,R
Auxilin J-domain protein, length: 114 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 8361
95 % 1 1 8415
90 % 1 1 8352
70 % 1 1 8044
50 % 1 1 7384
40 % 1 1 6800
30 % 1 1 5955

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures