Sequence Similarity Clusters for the Entities in PDB 1XED

Entity #1 | Chains: A,B,C,D,E,F
Polymeric-immunoglobulin receptor protein, length: 117 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 15839
95 % 1 1 16841 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.5
PDBFlex
90 % 1 1 16559
70 % 2 2 12688
50 % 2 2 11582
40 % 2 2 10904
30 % 2 2 10064

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures