Sequence Similarity Clusters for the Entities in PDB 1WYW

Entity #1 | Chains: A
G/T mismatch-specific thymine DNA glycosylase protein, length: 230 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 42763
95 % 1 2 33868 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 1.5
PDBFlex
90 % 1 2 32441
70 % 1 2 29046
50 % 1 2 25425
40 % 1 2 23188
30 % 1 2 20636
Entity #2 | Chains: B
Ubiquitin-like protein SMT3C protein, length: 97 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 9 7626
95 % 2 12 5704 Flexibility: Low
Max RMSD: 2.7, Avg RMSD: 1.4
PDBFlex
90 % 2 15 4682
70 % 2 16 4271
50 % 2 16 4242
40 % 2 16 4167
30 % 2 16 4017

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures