Sequence Similarity Clusters for the Entities in PDB 1WTH

Entity #1 | Chains: A
Tail-associated lysozyme protein, length: 584 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 67139
95 % 1 5 9776 Flexibility: Low
Max RMSD: 0.7, Avg RMSD: 0.6
PDBFlex
90 % 1 5 9252
70 % 1 5 9392
50 % 1 5 8776
40 % 1 5 8397
30 % 1 5 7494
Entity #2 | Chains: D
Baseplate structural protein Gp27 protein, length: 391 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 5 8855
95 % 1 5 9415 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 1.2
PDBFlex
90 % 1 5 9336
70 % 1 5 9058
50 % 1 5 8453
40 % 1 5 8103
30 % 1 5 7570

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures