Sequence Similarity Clusters for the Entities in PDB 1WT9

Entity #1 | Chains: A
agkisacutacin A chain protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 82988
95 % 1 2 35712 Flexibility: Low
Max RMSD: 0.5, Avg RMSD: 0.5
PDBFlex
90 % 1 3 26660
70 % 4 9 6318
50 % 7 33 589
40 % 18 80 254
30 % 51 138 150
Entity #2 | Chains: B
anticoagulant protein-B protein, length: 123 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 31476
95 % 1 3 27600 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 1 3 26661
70 % 4 9 6712
50 % 6 21 2426
40 % 19 80 254
30 % 52 138 150

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures