Sequence Similarity Clusters for the Entities in PDB 1WSS

Entity #1 | Chains: L
Coagulation factor VII protein, length: 152 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 27 33 1619
95 % 27 33 2120 Flexibility: Low
Max RMSD: 2.0, Avg RMSD: 0.9
PDBFlex
90 % 27 33 2163
70 % 27 33 2218
50 % 66 75 912
40 % 66 75 951
30 % 71 80 919
Entity #2 | Chains: H
Coagulation factor VII protein, length: 254 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 86 97 436
95 % 91 102 542 Flexibility: Low
Max RMSD: 4.1, Avg RMSD: 0.6
PDBFlex
90 % 91 102 567
70 % 91 102 596
50 % 91 102 639
40 % 260 291 189
30 % 1809 1980 6
Entity #3 | Chains: T
Tissue factor protein, length: 218 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 31 40 1215
95 % 32 41 1586 Flexibility: Low
Max RMSD: 3.0, Avg RMSD: 1.0
PDBFlex
90 % 32 41 1608
70 % 33 42 1573
50 % 33 42 1603
40 % 33 42 1658
30 % 33 42 1679

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures