Sequence Similarity Clusters for the Entities in PDB 1WRQ

Entity #1 | Chains: C,D
5'-R(*UP*UP*UP*AP*GP*UP*U)-3' rna, length: 7 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: A,B
Hut operon positive regulatory protein protein, length: 147 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 11 1472
95 % 5 11 1967 Flexibility: Low
Max RMSD: 2.5, Avg RMSD: 1.0
PDBFlex
90 % 5 11 2020
70 % 5 11 2061
50 % 6 13 1849
40 % 6 13 1891
30 % 6 13 1924

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1WPU 2 A, B Hut operon positive regulatory protein 1423
2 1WMQ 2 A, B Hut operon positive regulatory protein 1423
3 3BOY 2 A, B, C Hut operon positive regulatory protein 1423
4 1WPV 1 A, B, C Hut operon positive regulatory protein 1423
5 4OK9 1 A, B Hut operon positive regulatory protein HutP 33940
6 1WRQ 2 A, B Hut operon positive regulatory protein 1423
7 4OKQ 1 A, B Hut operon positive regulatory protein 33940
8 1WRN 1 A, B, C Hut operon positive regulatory protein 1423
9 1WRO 1 A, B, C Hut operon positive regulatory protein 1423
10 4H4L 1 A, B, C, D, E, F, G, H, I, J, K, L Hut operon positive regulatory protein 1423
11 1WPS 1 A, B Hut operon positive regulatory protein 1423
12 1WPT 1 A, B Hut operon positive regulatory protein 1423
13 1VEA 1 A, B Hut operon positive regulatory protein RNA-binding, antiterminator protein 1423