Sequence Similarity Clusters for the Entities in PDB 1WCO

Entity #1 | Chains: L
NAG-MUB-ALA-FGA-LYS-DAL-DAL PEPTIDE protein, length: 7 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #2 | Chains: N
NISIN Z protein, length: 34 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 80336
95 % 1 1 58571
90 % 1 1 55488
70 % 1 1 48183
50 % 1 1 40151
40 % 1 1 37522
30 % 1 1 33159

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures