Sequence Similarity Clusters for the Entities in PDB 1W8M

Entity #1 | Chains: A
PEPTIDYL-PROLYL CIS-TRANS ISOMERASE A protein, length: 165 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 30 120 161
95 % 38 138 156 Flexibility: No
Max RMSD: 2.2, Avg RMSD: 0.5
PDBFlex
90 % 38 138 164
70 % 67 197 142
50 % 71 234 129
40 % 71 236 145
30 % 71 236 151

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures