Sequence Similarity Clusters for the Entities in PDB 1W3N

Entity #1 | Chains: A,B,C,D
2-KETO-3-DEOXY GLUCONATE ALDOLASE protein, length: 294 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 5 3570
95 % 5 9 2520 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.3
PDBFlex
90 % 5 9 2583
70 % 5 9 2613
50 % 6 12 2083
40 % 6 14 1655
30 % 7 20 1075

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1W3I 1 A, B, C, D 2-KETO-3-DEOXY GLUCONATE ALDOLASE 2287 4.1.2.55 | Details
2 2YDA 1 A, B 2-KETO-3-DEOXY GLUCONATE ALDOLASE 2287 4.1.2.55 | Details
3 1W37 1 A, B, C, D 2-KETO-3-DEOXY GLUCONATE ALDOLASE 2287 4.1.2.55 | Details
4 1W3T 1 A, B, C, D 2-KETO-3-DEOXY GLUCONATE ALDOLASE 2287 4.1.2.55 | Details
5 1W3N 1 A, B, C, D 2-KETO-3-DEOXY GLUCONATE ALDOLASE 2287 4.1.2.55 | Details
6 6GSO 1 A, B, C, D 2-dehydro-3-deoxy-phosphogluconate/2-dehydro-3-deoxy-6-phosphogalactonate aldolase 2287 4.1.2.55 | Details
7 6GV2 1 A, B 2-dehydro-3-deoxy-phosphogluconate/2-dehydro-3-deoxy-6-phosphogalactonate aldolase 2287 4.1.2.55 | Details
8 6G3Z 1 A, B 2-dehydro-3-deoxy-phosphogluconate/2-dehydro-3-deoxy-6-phosphogalactonate aldolase 2287 4.1.2.55 | Details
9 6GT8 1 A, B 2-dehydro-3-deoxy-phosphogluconate/2-dehydro-3-deoxy-6-phosphogalactonate aldolase 2287 4.1.2.55 | Details