Sequence Similarity Clusters for the Entities in PDB 1W3N

Entity #1 | Chains: A,B,C,D
2-KETO-3-DEOXY GLUCONATE ALDOLASE protein, length: 294 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 5 3312
95 % 5 9 2398 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.3
PDBFlex
90 % 5 9 2578
70 % 5 9 2497
50 % 6 12 2057
40 % 6 14 1647
30 % 7 20 1071

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1W3I 1 A, B, C, D 2-KETO-3-DEOXY GLUCONATE ALDOLASE 2287 4.1.2.55 | Details
2 2NUW 1 A, B 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho gluconate aldolase 2285 4.1.2.55 | Details
3 2YDA 1 A, B 2-KETO-3-DEOXY GLUCONATE ALDOLASE 2287 4.1.2.55 | Details
4 1W37 1 A, B, C, D 2-KETO-3-DEOXY GLUCONATE ALDOLASE 2287 4.1.2.55 | Details
5 4PTN 1 A, B, C, D Probable 2-keto-3-deoxy-galactonate aldolase YagE 562 4.1.2.51 | Details
6 1W3T 1 A, B, C, D 2-KETO-3-DEOXY GLUCONATE ALDOLASE 2287 4.1.2.55 | Details
7 1W3N 1 A, B, C, D 2-KETO-3-DEOXY GLUCONATE ALDOLASE 2287 4.1.2.55 | Details
8 6GSO 1 A, B, C, D 2-dehydro-3-deoxy-phosphogluconate/2-dehydro-3-deoxy-6-phosphogalactonate aldolase 2287 4.1.2.55 | Details
9 2R91 1 A, B, C, D 2-Keto-3-deoxy-(6-phospho-)gluconate aldolase 2271 4.1.2.14 | Details 4.1.2.51 | Details
10 6GV2 1 A, B 2-dehydro-3-deoxy-phosphogluconate/2-dehydro-3-deoxy-6-phosphogalactonate aldolase 2287 4.1.2.55 | Details
11 3NA8 1 A, B, C, D putative dihydrodipicolinate synthetase 287 4.3.3.7 | Details
12 4OE7 1 A, B, C, D Probable 2-keto-3-deoxy-galactonate aldolase YagE 562 4.1.2.51 | Details
13 2V9D 1 A, B, C, D YAGE RESIDUES 3-309 562 4.1.2.51 | Details
14 2R94 1 A, B, C, D 2-Keto-3-deoxy-(6-phospho-)gluconate aldolase 2271 4.1.2.14 | Details 4.1.2.51 | Details
15 2V8Z 1 A, B, C, D YAGE RESIDUES 3-309 562 4.1.2.51 | Details
16 2NUY 1 A, B 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho gluconate aldolase 2285 4.1.2.55 | Details
17 6G3Z 1 A, B 2-dehydro-3-deoxy-phosphogluconate/2-dehydro-3-deoxy-6-phosphogalactonate aldolase 2287 4.1.2.55 | Details
18 2NUX 1 A, B 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho gluconate aldolase 2285 4.1.2.55 | Details
19 4ONV 1 A, B, C, D Probable 2-keto-3-deoxy-galactonate aldolase YagE 562 4.1.2.51 | Details
20 6GT8 1 A, B 2-dehydro-3-deoxy-phosphogluconate/2-dehydro-3-deoxy-6-phosphogalactonate aldolase 2287 4.1.2.55 | Details