Sequence Similarity Clusters for the Entities in PDB 1VWF

Entity #1 | Chains: B
STREPTAVIDIN protein, length: 123 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 73 83 206
95 % 121 149 104 Flexibility: Low
Max RMSD: 3.3, Avg RMSD: 1.3
PDBFlex
90 % 122 150 110
70 % 122 149 121
50 % 121 149 140
40 % 121 149 157
30 % 141 195 113
Entity #2 | Chains: P
PEPTIDE LIGAND CONTAINING HPQ protein, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures