Sequence Similarity Clusters for the Entities in PDB 1VQR

Entity #1 | Chains: A,B,C,D
hypothetical protein Cj0248 protein, length: 297 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 22806
95 % 1 1 22171 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 1 1 21517
70 % 1 1 19816
50 % 1 1 17609
40 % 1 1 16197
30 % 1 1 14627

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures