Sequence Similarity Clusters for the Entities in PDB 1VMK

Entity #1 | Chains: A,B,C
purine nucleoside phosphorylase protein, length: 277 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 30711
95 % 1 1 25860 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 1 1 26372
70 % 1 1 23979
50 % 1 1 20100
40 % 50 89 462
30 % 50 89 492

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1VMK 1 A, B, C purine nucleoside phosphorylase 2336 2.4.2.1 | Details