Sequence Similarity Clusters for the Entities in PDB 1VMK

Entity #1 | Chains: A,B,C
purine nucleoside phosphorylase protein, length: 277 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 32527
95 % 1 1 25762 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.4
PDBFlex
90 % 1 1 24910
70 % 1 1 23891
50 % 1 1 20010
40 % 50 89 460
30 % 50 89 489

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures