Sequence Similarity Clusters for the Entities in PDB 1VID

Entity #1 | Chains: A
CATECHOL O-METHYLTRANSFERASE protein, length: 221 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 28 37 1104
95 % 75 96 270 Flexibility: Medium
Max RMSD: 13.5, Avg RMSD: 3.5
PDBFlex
90 % 78 102 270
70 % 84 112 298
50 % 84 112 352
40 % 84 112 372
30 % 84 112 380

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures