Sequence Similarity Clusters for the Entities in PDB 1VGJ

Entity #1 | Chains: A
Hypothetical protein PH0099 protein, length: 184 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 42705
95 % 1 2 37769 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 1.0
PDBFlex
90 % 1 3 27269
70 % 1 3 24729
50 % 1 3 21726
40 % 1 3 19874
30 % 1 3 17795

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures