Sequence Similarity Clusters for the Entities in PDB 1VDE

Entity #1 | Chains: A,B
PI-SCEI protein, length: 454 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 5 12865
95 % 4 7 7994 Flexibility: Low
Max RMSD: 3.8, Avg RMSD: 1.7
PDBFlex
90 % 4 7 7947
70 % 4 7 7744
50 % 4 7 7110
40 % 4 7 7041
30 % 4 7 6606

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures