Sequence Similarity Clusters for the Entities in PDB 1VBU

Entity #1 | Chains: A,B
endo-1,4-beta-xylanase B protein, length: 328 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 25503
95 % 2 4 11864 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.2
PDBFlex
90 % 2 4 11688
70 % 2 4 11167
50 % 2 4 10252
40 % 31 62 913
30 % 66 131 355

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures