Sequence Similarity Clusters for the Entities in PDB 1VBI

Entity #1 | Chains: A
Type 2 malate/lactate dehydrogenase protein, length: 344 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 43807
95 % 1 2 39328 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 1.7
PDBFlex
90 % 1 2 37543
70 % 1 2 33313
50 % 1 2 28994
40 % 1 2 26309
30 % 5 14 1945

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures