Sequence Similarity Clusters for the Entities in PDB 1VAR

Entity #1 | Chains: A,B
MANGANESE SUPEROXIDE DISMUTASE protein, length: 198 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 57388
95 % 23 30 928 Flexibility: No
Max RMSD: 0.8, Avg RMSD: 0.4
PDBFlex
90 % 23 30 966
70 % 23 30 1006
50 % 79 93 193
40 % 117 135 141
30 % 130 149 123

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures