1V4U

Crystal structure of bluefin tuna carbonmonoxy-hemoglobin


Sequence Similarity Clusters for the Entities in PDB 1V4U

Entity #1 | Chains: A,C
hemoglobin alpha chain protein, length: 144 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 15372
95 % 3 3 16669
90 % 3 3 16386
70 % 19 29 1500
50 % 25 39 1095
40 % 30 44 977
30 % 434 831 12
Entity #2 | Chains: B,D
hemoglobin beta chain protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 18094
95 % 3 3 16581
90 % 3 3 16293
70 % 3 3 15274
50 % 400 782 7
40 % 400 782 8
30 % 435 831 12

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 3D1K 1 A Hemoglobin subunit alpha-1 35730
2 2H8F 1 A, C Hemoglobin alpha subunit 40690
3 3GKV 1 A Hemoglobin subunit alpha 40690
4 6RP5 1 A Hemoglobin subunit alpha 1 56733
5 4ODC 1 A Hemoglobin subunit alpha 40690
6 4ESA 1 A, C Hemoglobin alpha chain 56733
7 2PEG 1 A Hemoglobin subunit alpha 40690
8 3GQG 1 A, C Hemoglobin subunit alpha 40690
9 1V4X 1 A, C hemoglobin alpha chain 8237
10 1V4W 1 A, C hemoglobin alpha chain 8237
11 2H8D 1 A, C Hemoglobin alpha subunit 40690
12 2AA1 1 A, C Hemoglobin alpha-1 chain 35730
13 3BJ1 1 A, C hemoglobin alpha 8167
14 5LFG 1 A, C Hemoglobin subunit alpha-1 35730
15 1LA6 1 A Hemoglobin alpha-1 chain 35730
16 3BJ2 1 A, C hemoglobin alpha 8167
17 3NFE 1 A, C Hemoglobin subunit alpha-1 35730
18 1HBH 1 A, C HEMOGLOBIN (DEOXY) (ALPHA CHAIN) 40690
19 1V4U 1 A, C hemoglobin alpha chain 8237
20 1XQ5 1 A, C Hemoglobin alpha-1 chain 8167
21 3BJ3 1 A, C hemoglobin alpha 8167
22 1T1N 1 A PROTEIN (HEMOGLOBIN) HEM GROUP IS COMPLEXED WITH CARBON MONOXIDE 35730
23 3NG6 1 A, C Hemoglobin subunit alpha-1 35730
24 3BCQ 1 A, C Alpha-chain hemoglobin 126311
25 4IRO 1 A, C Hemoglobin subunit alpha 40690
26 1PBX 1 A HEMOGLOBIN (CARBONMONOXY) (ALPHA CHAIN) 40690
27 1S5X 1 A Hemoglobin alpha chain 40690
28 4G51 1 A, C Hemoglobin subunit alpha 40690
29 1S5Y 1 A, C Hemoglobin alpha chain 40690