1V4U

Crystal structure of bluefin tuna carbonmonoxy-hemoglobin


Sequence Similarity Clusters for the Entities in PDB 1V4U

Entity #1 | Chains: A,C
hemoglobin alpha chain protein, length: 144 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 15222
95 % 3 3 16515
90 % 3 3 16222
70 % 19 29 1476
50 % 25 39 1079
40 % 30 44 966
30 % 434 831 11
Entity #2 | Chains: B,D
hemoglobin beta chain protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 15744
95 % 3 3 16514
90 % 3 3 16217
70 % 3 3 14537
50 % 400 782 7
40 % 400 782 8
30 % 435 831 11

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures