Sequence Similarity Clusters for the Entities in PDB 1V3S

Entity #1 | Chains: A,B,C
Nitrogen regulatory protein P-II protein, length: 116 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 5 4713
95 % 3 5 5712 Flexibility: Low
Max RMSD: 3.9, Avg RMSD: 0.8
PDBFlex
90 % 3 5 5662
70 % 3 5 5589
50 % 3 5 5491
40 % 28 55 409
30 % 28 57 408

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures