Sequence Similarity Clusters for the Entities in PDB 1UNL

Entity #1 | Chains: A,B
CYCLIN-DEPENDENT KINASE 5 protein, length: 292 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 4 9702
95 % 3 6 7200 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 1.1
PDBFlex
90 % 3 6 7204
70 % 3 6 7058
50 % 313 436 78
40 % 314 461 87
30 % 471 736 24
Entity #2 | Chains: D,E
CYCLIN-DEPENDENT KINASE 5 ACTIVATOR 1 protein, length: 208 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 16322
95 % 1 3 15884 Flexibility: Low
Max RMSD: 3.7, Avg RMSD: 1.6
PDBFlex
90 % 1 3 15642
70 % 1 3 14684
50 % 1 3 13269
40 % 1 3 12341
30 % 1 3 11267

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures