Sequence Similarity Clusters for the Entities in PDB 1UM9

Entity #1 | Chains: A,C
2-oxo acid dehydrogenase alpha subunit protein, length: 367 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 11467
95 % 3 4 10809 Flexibility: No
Max RMSD: 1.0, Avg RMSD: 0.4
PDBFlex
90 % 3 4 11971
70 % 3 4 11424
50 % 3 4 10487
40 % 4 9 2662
30 % 4 9 2648
Entity #2 | Chains: B,D
2-oxo acid dehydrogenase beta subunit protein, length: 324 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 4 11737
95 % 3 4 11238 Flexibility: No
Max RMSD: 1.1, Avg RMSD: 0.4
PDBFlex
90 % 3 4 11072
70 % 3 4 10719
50 % 4 11 2254
40 % 27 35 1237
30 % 31 44 739

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures