Sequence Similarity Clusters for the Entities in PDB 1UKI

Entity #1 | Chains: A
mitogen-activated protein kinase 8 isoform 4 protein, length: 369 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 7 12220
95 % 19 32 1380 Flexibility: Low
Max RMSD: 4.1, Avg RMSD: 1.7
PDBFlex
90 % 56 77 535
70 % 65 86 506
50 % 65 86 530
40 % 332 381 122
30 % 332 381 131
Entity #2 | Chains: B
11-mer peptide from C-jun-amino-terminal kinase interacting protein 1 protein, length: 11 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures