Sequence Similarity Clusters for the Entities in PDB 1UGP

Entity #1 | Chains: A
Nitrile Hydratase alpha subunit protein, length: 203 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 4 29259
95 % 4 9 9847 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.1
PDBFlex
90 % 4 9 9769
70 % 4 9 9478
50 % 4 9 8830
40 % 4 9 8457
30 % 4 9 7883
Entity #2 | Chains: B
Nitrile Hydratase beta subunit protein, length: 226 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 10 8531
95 % 5 10 9027 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.3
PDBFlex
90 % 5 10 8430
70 % 5 10 8720
50 % 5 10 7683
40 % 6 18 2281
30 % 29 50 738

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures