Sequence Similarity Clusters for the Entities in PDB 1U8W

Entity #1 | Chains: A,B,C,D,E,F
Nucleoside diphosphate kinase I protein, length: 149 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 15815
95 % 1 1 15274 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.3
PDBFlex
90 % 1 1 13427
70 % 4 5 1238
50 % 71 97 116
40 % 119 159 55
30 % 119 159 58

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures