Sequence Similarity Clusters for the Entities in PDB 1TZG

Entity #1 | Chains: L,M
Fab 4E10 protein, length: 214 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 12 22 942
95 % 12 22 1322 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.7
PDBFlex
90 % 76 228 80
70 % 853 2262 2
50 % 1084 2875 2
40 % 1084 2875 2
30 % 2211 5831 1
Entity #2 | Chains: H,I
Fab 4E10 protein, length: 232 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 20 1011
95 % 12 23 1290 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 0.9
PDBFlex
90 % 12 23 1324
70 % 1050 2773 1
50 % 1113 2914 1
40 % 1113 2914 1
30 % 2212 5831 1
Entity #3 | Chains: P,Q
Envelope polyprotein GP160 protein, length: 13 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures