Sequence Similarity Clusters for the Entities in PDB 1TTQ

Entity #1 | Chains: A
TRYPTOPHAN SYNTHASE protein, length: 268 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 39 53 858
95 % 49 66 869 Flexibility: Low
Max RMSD: 2.6, Avg RMSD: 0.5
PDBFlex
90 % 49 66 913
70 % 50 70 832
50 % 51 73 728
40 % 51 73 766
30 % 57 91 461
Entity #2 | Chains: B
TRYPTOPHAN SYNTHASE protein, length: 397 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 16 3901
95 % 49 68 840 Flexibility: Low
Max RMSD: 4.3, Avg RMSD: 0.7
PDBFlex
90 % 49 68 899
70 % 49 69 897
50 % 65 92 407
40 % 65 92 430
30 % 65 92 446

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures