Sequence Similarity Clusters for the Entities in PDB 1TN7

Entity #1 | Chains: A
Protein farnesyltransferase alpha subunit protein, length: 377 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 11 34 505
95 % 16 42 622 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.6
PDBFlex
90 % 28 56 539
70 % 28 56 574
50 % 28 56 605
40 % 28 56 634
30 % 28 56 665
Entity #2 | Chains: B
Protein farnesyltransferase beta subunit protein, length: 437 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 17 41 1213
95 % 29 56 1150 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 0.7
PDBFlex
90 % 29 56 1182
70 % 29 56 1212
50 % 29 56 1248
40 % 29 56 1288
30 % 29 56 1326
Entity #3 | Chains: C
Fusion protein protein, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures