Sequence Similarity Clusters for the Entities in PDB 1T1N

Entity #1 | Chains: A
PROTEIN (HEMOGLOBIN) protein, length: 143 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 7 7616
95 % 13 19 2490 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.5
PDBFlex
90 % 13 19 2545
70 % 22 29 1450
50 % 29 39 1055
40 % 34 44 943
30 % 533 831 11
Entity #2 | Chains: B
PROTEIN (HEMOGLOBIN) protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 5 6 8990
95 % 5 6 9633 Flexibility: Low
Max RMSD: 1.5, Avg RMSD: 0.8
PDBFlex
90 % 12 18 2632
70 % 19 26 1598
50 % 495 782 6
40 % 495 782 7
30 % 534 831 11

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures