Sequence Similarity Clusters for the Entities in PDB 1SUV

Entity #1 | Chains: A,B
Transferrin receptor protein 1 protein, length: 639 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 4607
95 % 8 8 2800
90 % 8 8 2847
70 % 8 8 2826
50 % 8 8 2786
40 % 8 8 2737
30 % 8 8 2573
Entity #2 | Chains: C,D
Serotransferrin, N-lobe protein, length: 329 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 7 4913
95 % 21 21 1640
90 % 21 21 1673
70 % 22 22 1642
50 % 37 37 1118
40 % 115 116 431
30 % 115 116 433
Entity #3 | Chains: E,F
Serotransferrin, C-lobe protein, length: 345 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 35840
95 % 1 1 28388
90 % 1 1 27402
70 % 3 3 15632
50 % 79 79 659
40 % 116 116 431
30 % 116 116 433

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures