Sequence Similarity Clusters for the Entities in PDB 1SUV

Entity #1 | Chains: A,B
Transferrin receptor protein 1 protein, length: 639 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 4492
95 % 8 8 2732
90 % 8 8 2777
70 % 8 8 2754
50 % 8 8 2715
40 % 8 8 2673
30 % 8 8 2511
Entity #2 | Chains: C,D
Serotransferrin, N-lobe protein, length: 329 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 7 7 4797
95 % 21 21 1601
90 % 21 21 1629
70 % 22 22 1599
50 % 37 37 1095
40 % 115 116 407
30 % 115 116 416
Entity #3 | Chains: E,F
Serotransferrin, C-lobe protein, length: 345 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 35064
95 % 1 1 27825
90 % 1 1 26878
70 % 3 3 15304
50 % 79 79 644
40 % 116 116 407
30 % 116 116 416

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.