Sequence Similarity Clusters for the Entities in PDB 1SUV

Entity #1 | Chains: A,B
Transferrin receptor protein 1 protein, length: 639 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 6291
95 % 11 11 2260
90 % 11 11 2316
70 % 11 11 2311
50 % 11 11 2245
40 % 11 11 2225
30 % 11 11 2094
Entity #2 | Chains: C,D
Serotransferrin, N-lobe protein, length: 329 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 8 8 8213
95 % 21 21 1723
90 % 21 21 1759
70 % 22 22 1694
50 % 37 37 1162
40 % 115 116 445
30 % 115 116 456
Entity #3 | Chains: E,F
Serotransferrin, C-lobe protein, length: 345 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 45199
95 % 1 1 37703
90 % 1 1 35961
70 % 3 3 18187
50 % 79 79 672
40 % 116 116 445
30 % 116 116 456

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures