Sequence Similarity Clusters for the Entities in PDB 1SMH

Entity #1 | Chains: A
cAMP-Dependent Protein Kinase, alpha-catalytic subunit protein, length: 350 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 57512
95 % 173 293 123 Flexibility: Low
Max RMSD: 5.7, Avg RMSD: 1.0
PDBFlex
90 % 174 296 127
70 % 174 296 138
50 % 174 296 163
40 % 174 296 175
30 % 175 297 181
Entity #2 | Chains: B
cAMP-dependent protein kinase inhibitor, alpha form protein, length: 20 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 73 138 231
95 % 73 138 300 Flexibility: Low
Max RMSD: 3.7, Avg RMSD: 0.8
PDBFlex
90 % 91 165 273
70 % 91 165 312
50 % 91 165 364
40 % 91 165 382
30 % 91 165 397

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures