Sequence Similarity Clusters for the Entities in PDB 1SIP

Entity #1 | Chains: A
UNLIGANDED SIV PROTEASE protein, length: 99 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 71471
95 % 2 7 10172 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.6
PDBFlex
90 % 2 7 9654
70 % 14 26 1408
50 % 651 779 5
40 % 651 779 6
30 % 651 779 12

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1AZ5 1 A SIV PROTEASE 11723 3.4.23.16 | Details
2 1SIP 1 A UNLIGANDED SIV PROTEASE 11723 3.4.23 | Details
3 1YTI 1 A SIV PROTEASE 11723 3.4.23.16 | Details
4 2SAM 1 A SIV PROTEASE 11723
5 1YTJ 1 A SIV PROTEASE 11723 3.4.23.16 | Details
6 1TCW 1 A, B SIV PROTEASE 11723 3.4.23.16 | Details
7 1SIV 1 A, B SIV PROTEASE 11723