Sequence Similarity Clusters for the Entities in PDB 1SDO

Entity #1 | Chains: A
BstYI protein, length: 203 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 18974
95 % 1 3 16664 Flexibility: Low
Max RMSD: 2.3, Avg RMSD: 1.5
PDBFlex
90 % 1 3 16485
70 % 1 3 15300
50 % 1 3 13835
40 % 1 3 13216
30 % 1 3 11737

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures