Sequence Similarity Clusters for the Entities in PDB 1SA0

Entity #1 | Chains: A,C
Tubulin alpha chain protein, length: 451 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 18087
95 % 125 234 35 Flexibility: Low
Max RMSD: 3.4, Avg RMSD: 1.0
PDBFlex
90 % 125 235 38
70 % 127 245 42
50 % 127 245 77
40 % 254 490 12
30 % 260 498 18
Entity #2 | Chains: B,D
Tubulin beta chain protein, length: 445 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 9 53 201
95 % 126 231 38 Flexibility: Low
Max RMSD: 3.2, Avg RMSD: 0.7
PDBFlex
90 % 126 238 35
70 % 128 245 41
50 % 128 245 76
40 % 255 490 12
30 % 261 498 18
Entity #3 | Chains: E
Stathmin 4 protein, length: 142 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 87 93 407
95 % 100 107 446 Flexibility: Low
Max RMSD: 4.1, Avg RMSD: 0.9
PDBFlex
90 % 100 107 477
70 % 100 107 514
50 % 100 107 545
40 % 100 107 582
30 % 100 107 605

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures