Sequence Similarity Clusters for the Entities in PDB 1S1X

Entity #1 | Chains: A
Reverse transcriptase protein, length: 560 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 77370
95 % 178 291 109 Flexibility: Medium
Max RMSD: 23.5, Avg RMSD: 3.7
PDBFlex
90 % 178 291 116
70 % 178 291 126
50 % 179 292 149
40 % 179 293 163
30 % 179 293 166
Entity #2 | Chains: B
Reverse transcriptase protein, length: 440 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 77371
95 % 173 285 114 Flexibility: Low
Max RMSD: 13.7, Avg RMSD: 1.5
PDBFlex
90 % 173 285 122
70 % 173 285 129
50 % 174 286 154
40 % 174 287 169
30 % 174 287 173

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures