Sequence Similarity Clusters for the Entities in PDB 1RUT

Entity #1 | Chains: X
Fusion protein of Lmo4 protein and LIM domain-binding protein 1 protein, length: 188 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 33688
95 % 1 2 28003 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.1
PDBFlex
90 % 1 2 27025
70 % 1 2 24550
50 % 1 3 10936
40 % 1 3 10291
30 % 1 3 9496

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures