Sequence Similarity Clusters for the Entities in PDB 1RPN

Entity #1 | Chains: A,B,C,D
GDP-mannose 4,6-dehydratase protein, length: 335 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 24847
95 % 1 1 25285 Flexibility: No
Max RMSD: 0.1, Avg RMSD: 0.1
PDBFlex
90 % 1 1 24464
70 % 1 1 22330
50 % 9 12 1521
40 % 9 12 1558
30 % 9 12 1585

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures