Sequence Similarity Clusters for the Entities in PDB 1RM6

Entity #1 | Chains: A,D
4-hydroxybenzoyl-CoA reductase alpha subunit protein, length: 769 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 21181
95 % 1 2 19682 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.3
PDBFlex
90 % 1 2 18992
70 % 1 2 17619
50 % 1 2 15961
40 % 1 2 14643
30 % 6 11 3408
Entity #2 | Chains: B,E
4-hydroxybenzoyl-CoA reductase beta subunit protein, length: 324 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 25788
95 % 1 2 19681 Flexibility: No
Max RMSD: 0.2, Avg RMSD: 0.1
PDBFlex
90 % 1 2 18933
70 % 1 2 17806
50 % 1 2 15960
40 % 1 2 14803
30 % 1 2 13422
Entity #3 | Chains: C,F
4-hydroxybenzoyl-CoA reductase gamma subunit protein, length: 161 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 22287
95 % 1 2 20105 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.4
PDBFlex
90 % 1 2 19631
70 % 1 2 18171
50 % 1 2 16243
40 % 6 14 2908
30 % 6 14 2885

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures