1RLP

TWO BINDING ORIENTATIONS FOR PEPTIDES TO SRC SH3 DOMAIN: DEVELOPMENT OF A GENERAL MODEL FOR SH3-LIGAND INTERACTIONS


Sequence Similarity Clusters for the Entities in PDB 1RLP

Entity #1 | Chains: C
C-SRC TYROSINE KINASE SH3 DOMAIN protein, length: 64 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 6 15759
95 % 34 37 1421
90 % 34 37 1455
70 % 44 47 1095
50 % 47 50 972
40 % 74 77 556
30 % 277 285 155
Entity #2 | Chains: R
PROLINE-RICH LIGAND RLP2 (RALPPLPRY) protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures