Sequence Similarity Clusters for the Entities in PDB 1R1Y

Entity #1 | Chains: A,C
Hemoglobin alpha chain protein, length: 141 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 30135
95 % 55 256 40 Flexibility: Low
Max RMSD: 4.4, Avg RMSD: 0.7
PDBFlex
90 % 56 257 44
70 % 69 340 22
50 % 153 735 7
40 % 153 735 7
30 % 167 783 10
Entity #2 | Chains: B,D
Hemoglobin beta chain protein, length: 146 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 40 166 81
95 % 55 257 36 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 0.7
PDBFlex
90 % 56 262 38
70 % 71 350 17
50 % 154 735 7
40 % 154 735 7
30 % 168 783 10

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 1R1Y 1 A, C Hemoglobin alpha chain 9606
2 1R1X 1 A Hemoglobin alpha chain 9606